Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015877315.1_cds_XP_016436436.1_32294
CDS Infomation

[gene=LOC107762579] [db_xref=GeneID:107762579] [protein=probable protein phosphatase 2C 65] [protein_id=XP_016436436.1] [location=join(87214..87459,87923..88231,88639..88756,88858..89081,89730..90188)] [gbkey=CDS]
Sequence

ATGGGTGCATGTTGTTCCTGTCAAAGGGTACGGCATTTTGATCAAGGAAATTATCGTCAC
CATTTTGTGGAGGAGAAAGAGGAGAAAGATATTATTAATGTTGAAGATGATAATTATAAT
GGTAATTTTGTAGGAAAGGGAGATTTTGGTGCTCATATTAGGTTGCATGGATATTCTAAA
TTTGTATCAATGTATAGTCAACAAGGTAAAAAGGGGATTAATCAAGATGCCATGACTGTT
TGGGAGAACTTTGGTGGACAGAAAGGTGCGTTCTTTTGTGGTGTATTTGATGGACATGGT
CCCTCCGGCCACAAGGTTGCACGCTATGTGCGCGACTCGTTACCGTCGAAAATTTCATCA
TTGTTGAAGGAGTCTAATAATGTGAGTGAAATTACAAGCACTGAAAATGGTGATGAATCT
GATCAGAACCCACTCTTTGCTGCAACGAAAGCTGCATTTCTCAAATCCTTTAAGGAAATG
GATGAAGAACTTGAAAAGGAACCTTCTATTGAGAGTTATTCCAGTGGCACAACAGCTGTT
ACTTTATTTAAGCAGGGAGAACATTTGTTAATTGGAAACTTAGGGGATTCTCGAGCTATA
ATTTGCACCAGGGATGAGAAAAATCAGCTTATTTCCGAACAACTCACAGTGGACTTGAAG
CCTCATATTCCAAGTGAATATGAAAGAATCAAAAGTTGCAAAGGAAGAGTAATGGCAATG
GAACAAGAACCAAATGTATATAGAGTTTGGATGCCAGATGAAGATTGCCCTGGCTTGGCC
ATGGCTAGAGCTTTTGGAGATTTTTGCTTGAAAGACTATGGCCTCATTTCTGTCCCTGAA
GTTTATTACAGAAAGCTTACTGAGAGAGACGAATTTGTTGTATTGGCAACTGATGGGGTG
TGGGATGTTTTAAGCAACGATGAAGTGATACGGATAGTAGCTACAGCAAGAAAACGATCA
ATGGCAGCAAAATTGCTGGTGGAATGTGCAGTTAGAGCCTGGAAATACAAATATCCACGC
GCAAAGATAGACGATTGTGCTGTAGTATGTTTGTTTTTGAAACGCCAAAGGCCACTATTA
ACCAAATCAATGTCCGAGGTTACACAATTGAGCTTCAACTATACAGAACTAGCAACCGAT
CAAAATAACCCTGAGAATGCCAAAACAGACGATGGCCTTGATACGTTGCTTAATTTTCAA
GTCGAAGAAGATGAAGATGATCAAGATATTGCTCGTGGACCTGAAGATGGACGGGATAAT
GATAATAAAAATTCATCGACTACAGAGCATAAACATAATCAGGGCCGGCGAAGAAGATCT
GGAATGAAATTTGTGTATCCTGATGATCATCAATAA

Peptide Sequence

PEP ID

XP_016436436.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 65 [Nicotiana tabacum]
Sequence

MGACCSCQRVRHFDQGNYRHHFVEEKEEKDIINVEDDNYNGNFVGKGDFGAHIRLHGYSK
FVSMYSQQGKKGINQDAMTVWENFGGQKGAFFCGVFDGHGPSGHKVARYVRDSLPSKISS
LLKESNNVSEITSTENGDESDQNPLFAATKAAFLKSFKEMDEELEKEPSIESYSSGTTAV
TLFKQGEHLLIGNLGDSRAIICTRDEKNQLISEQLTVDLKPHIPSEYERIKSCKGRVMAM
EQEPNVYRVWMPDEDCPGLAMARAFGDFCLKDYGLISVPEVYYRKLTERDEFVVLATDGV
WDVLSNDEVIRIVATARKRSMAAKLLVECAVRAWKYKYPRAKIDDCAVVCLFLKRQRPLL
TKSMSEVTQLSFNYTELATDQNNPENAKTDDGLDTLLNFQVEEDEDDQDIARGPEDGRDN
DNKNSSTTEHKHNQGRRRRSGMKFVYPDDHQ

Transcript Sequence

Gene sequence data has not been registered.